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I know once you fix the arms, or legs manually due to occlusion, you can not run the Refine process on these areas again after, or it may affect all previous manually set positioning adversely.
As for the individual tracking option to turn the arms off to remove them from the tracking process, it should work this way, it removes them on my end, but it also may not follow the manual positioning you set prior, it turns off connection from the frame and position you turn them off at and just moves with the torso from there, until they are re-selected again, but it also shows the area in question can not have been tracked first with them selected, even if they didn't track correctly due to occlusion, try isolating the area of the ROI you wish to affect and deleting all animation in this area, (See below), then turning them off just prior to tracking the area in question, it looks like this is working on my end, then you can set the arms manually after this at a later point, just don't run Refine with them re-selected in the area you set them manually afterwards.
Be aware turning off arm tracking may also affect the proper tracking of the clavicles and upper back also.
If the area was already tracked through with the arms on, simply set the frame on the ROI to the frame you wish and drag the ROI bar until it snaps to that frame, (or click the gray ribbon icon for this), then do the other end of the ROI until it falls to the area you wish to re-track, then in the drop-down menu of the Edit tab, select Delete all animations within ROI and try to re-track just that area with the arms turned off first.
I am referring to performing this with PS Eyes and it works, I don't use Kinects, but I would imagine the process should work the same way, so iPi will have to address the issue if it isn't for Kinects.
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