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In my experience, Kinects at 90 degrees has worked better. My guess is that you have less IR interference when the cameras are not pointed directly at each other. Also, at 180, the data quality gets weaker as you move away from one device and stronger towards the other and with the 90 degree setup, the data quality stays more a little more even between devices. Be advised that I'm just guessing--I don't know if my observation actually means anything to the software. But, FWIW, I've had much better luck tracking 90 degree data.
BTW, when the Kinects are at 90, you can get nearly full coverage because you're recording an actual 3D image from each camera. Where tracking might fail is if you completely turn away from both cameras and crouch down and hold your hands close to your body, making sure to occlude them from camera--but if that's the motion you want to capture, you're better off turning your performance around to face camera. No point making the process more difficult than necessary. :)
Hope this helps.
G.
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