Yes, tracking speed is entirely dependent on your graphics card. What type of Nvidia card are you using? The fast ones for iPi Mocap Studio are the Geforce GTX series. Anything less is quite a bit slower.
There is a comparison chart in the wiki. It's a little out-of-date* but still useful:
http://wiki.ipisoft.com/Cameras_and_acc ... Video_CardI have an old Geforce GTX 460, and with four PS3 Eye cameras, my time is about 0.67 second per frame. Newer GTX cards can be significantly faster than this.
G.
*Prices, for example, are way out-of-date. I bought my Geforce GTX 460 for about $160 dollars a couple of years ago. Nowadays you should be able to get a better graphics card for this price or even cheaper.